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Respiration - Term 1 Human Body Notes

Term 1 Human Body Notes
Module

The Human Body (PY4010)

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Aerobic Respiration and the Mitochondrion

Metabolism is the set of life-sustaining chemical transformations within the cells of

organisms.

Three main purposes of metabolism:

• Catabolic for the conversion of fuel to energy

• Anabolic for the conversion of fuel to building blocks

• The elimination of nitrogenous wastes

ATP is a combination of adenine, ribose sugar and three phosphates.

ATP + H 2 O = ADP + Pi

The phosphorylation potential (delta G) is –30 kJ/mol

The phosphorylation potential (amount of energy released) is high because hydrolysis

releases a lot of free enthalpy.

Stages of catabolism:

• Bigger molecules broken down into smaller parts

• Small molecules converted into simple units that have a central role in

metabolism

• Production of ATP

The first 2 stages are anaerobic.

Glycolysis

First stage:

Glucose into fructose 1,6-bisphosphate, which can be kept easily in the cell. Consumes 2

molecules of ATP and is irreversible.

• Glucose to glucose 6-phosphate using hexokinase

• Glucose 6-phosphate to fructose 6-phosphate using phosphoglucose isomerase

• Fructose 6-phosphate to fructose 1,6-biphosphate using phosphofructokinase

2 nd Stage:

Splitting of 6 carbon molecules into two 3 carbon molecules. These are not identical, so

we isomerise the dihydroxyacetone phosphate into glyceraldehyde 3-phosphate using

triose phosphate isomerase. From this point onwards every reaction happens TWICE as

there are 2 copies of each molecule.

3 rd Stage:

• Glyceraldehyde 3-phosphate undergoes oxidation and phosphorylation to 1,3-

biphosphoglycerate using the addition of an inorganic phosphate and a co-factor.

This uses the enzyme glyceraldehyde phosphate dehydrogenase

• Substrate level phosphorylation of 1,3-biphosphoglycerate to 3-phospho-

glycerate using phosphoglycerate kinase and a phosphate is donated to form 1

molecule of ATP from ADP

• Intramolecular transfer of 3-phosphoglycerate to 2-phosphoglycerate using

phosphoglyceromutase

• Dehydration of 2-phosphoglycerate to phosphoenolpyruvate

• Substrate level phosphorylation of phosphoenolpyruvate to pyruvate, where 1

ATP is produced

So, in stage 3, 2 x 2 ATP are produced by substrate level phosphorylation. So, 4 ATP

produced but 2 used up.

Uses of pyruvate:

Middle and left involve anaerobic oxidation of NADH.

The Cori Cycle shows what happens under anaerobic conditions.

Glycolysis takes place in the cytoplasm; the second step takes place in the mitochondrion. This is

known as pyruvate oxidation, or the link reaction.

• Pyruvate enters the mitochondria via transport protein, and we lose Carbon dioxide,

which we breath out.

• NAD+ goes to NADH.

• Coenzyme A is used to produce Acetyl CoA

Stage 3 is known as the Krebs Cycle or Tricarboxylic acid cycle (TCA)

Overall, we produce 2 x 3 NADH, 2 x 1 FADH 2 and 2 x 1 GTP

Both NADH/FADH 2 and NAD/FAD are redox electron carriers, so they are easily reduced and

easily oxidised.

The final stage is oxidative phosphorylation.

Electrons of NADH/FADH 2 are used to slowly oxidise oxygen to water. The energy released is

used to pump H+ across the inner membrane, and this H+ gradient is used to form ATP.

2 ATP produced (per glucose).

Mitochondria has a bilayer.

• Electrons from NADH go into complex 1, which pumps 4 H+ across into intermembrane

space

• Electrons from FADH 2 go into complex 2, and associates with enzyme Q

• Electrons then transferred onto complex 3, and a further 4 H+ get pumped into the

intermembrane space. This lowers the pH of the intermembrane space.

• Electrons move from complex 3 and attach to cytochrome c, which then transfer the

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Respiration - Term 1 Human Body Notes

Module: The Human Body (PY4010)

171 Documents
Students shared 171 documents in this course
Was this document helpful?
Aerobic Respiration and the Mitochondrion
Metabolism is the set of life-sustaining chemical transformations within the cells of
organisms.
Three main purposes of metabolism:
Catabolic for the conversion of fuel to energy
Anabolic for the conversion of fuel to building blocks
The elimination of nitrogenous wastes
ATP is a combination of adenine, ribose sugar and three phosphates.
ATP + H2O = ADP + Pi
The phosphorylation potential (delta G) is –30.5 kJ/mol
The phosphorylation potential (amount of energy released) is high because hydrolysis
releases a lot of free enthalpy.
Stages of catabolism:
Bigger molecules broken down into smaller parts
Small molecules converted into simple units that have a central role in
metabolism
Production of ATP
The first 2 stages are anaerobic.
Glycolysis
First stage:
Glucose into fructose 1,6-bisphosphate, which can be kept easily in the cell. Consumes 2
molecules of ATP and is irreversible.
Glucose to glucose 6-phosphate using hexokinase
Glucose 6-phosphate to fructose 6-phosphate using phosphoglucose isomerase
Fructose 6-phosphate to fructose 1,6-biphosphate using phosphofructokinase
2nd Stage:
Splitting of 6 carbon molecules into two 3 carbon molecules. These are not identical, so
we isomerise the dihydroxyacetone phosphate into glyceraldehyde 3-phosphate using
triose phosphate isomerase. From this point onwards every reaction happens TWICE as
there are 2 copies of each molecule.
3rd Stage:
Glyceraldehyde 3-phosphate undergoes oxidation and phosphorylation to 1,3-
biphosphoglycerate using the addition of an inorganic phosphate and a co-factor.
This uses the enzyme glyceraldehyde phosphate dehydrogenase